Description
Enregistrements de données
Les données de cette ressource données d'échantillonnage ont été publiées sous forme dune Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant quensemble dun ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 51 enregistrements.
1 tableurs de données dextension existent également. Un enregistrement dextension fournit des informations supplémentaires sur un enregistrement du cœur de standard (core). Le nombre denregistrements dans chaque tableur de données dextension est illustré ci-dessous.
Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.
Versions
Le tableau ci-dessous naffiche que les versions publiées de la ressource accessibles publiquement.
Droits
Les chercheurs doivent respecter la déclaration de droits suivante:
L’éditeur et détenteur des droits de cette ressource est University of Bergen. Ce travail est sous licence Creative Commons Attribution (CC-BY) 4.0.
Enregistrement GBIF
Cette ressource a été enregistrée sur le portail GBIF, et possède lUUID GBIF suivante : 85b25e06-1f6b-48ea-8597-136b0ca5f160. University of Bergen publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec lapprobation du GBIF Norway.
Mots-clé
Samplingevent; Coleoptera; 28S; canopy fogging; COI; Ecuador; EF-1α; molecular phylogeny; Scolytodes
Contacts
- Fournisseur Des Métadonnées ●
- Créateur ●
- Personne De Contact
- Professor in Systematic Entomology
http://orcid.org/0000-0001-6082-443X
- Créateur
- Utilisateur
Couverture taxonomique
Scolytodes
| Genus | Scolytodes (Bark beetles) |
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Méthodes déchantillonnage
Trapping of beetles was primarily done using Petrov flight intercept traps, ‘Petrov FIT’, as described in Nikulina et al. (2015). Measurements were made as previously reported in Jordal (1998b). Scolytodes is here treated as masculine as originally proposed and later corroborated by Alonso-Zarazaga & Lyal (2009) and followed by Bright (2019). All feminine amended names in Wood (2007) are therefore rejected. All holotypes are either deposited in Ecuador at Museo de Zoologia, Pontificia Universidad Catolica del Ecuador, Quito or U.S. National Museum of Natural History and held in trust for Museo Ecuatoriano de Ciencias Naturales (MECN), Quito. Other material studied are deposited in the following institutions: MECN Museo Ecuatoriano de Ciencias Naturales, Quito. MSUC A.J. Cook Arthropod Research Collection, Michigan State University, East Lansing. NHMW Naturhistorisches Museum, Wien. QCAZ Museo de Zoologia, Pontificia Universidad Catolica del Ecuador, Quito (PUCE). USNM U.S. National Museum of Natural History, Washington D.C. ZMBN Zoological collections (entomology) at the University Museum of Bergen.
| Etendue de létude | Samples were provided from various field expeditions to Ecuador and by a long-term canopy fogging project executed in the primary forest in Amazon Basin in Yasuní National Park at the Tiputini Biodiversity Station and Okone Gare Station located in Orellana province. Sites were sampled twice a year during each of the rainy (May–October) and dry seasons (November–April) and are detailed in Erwin et al. (2005). At the time of Erwin’s collecting (1998 and prior), the Orellana province had not yet been separated from the Napo province and label data on these specimens give Napo as the province. Hand collecting was made in primary forests at the Tiputini Biodiversity station, Yakusinchi Reserve (El Cotopaxi province), Murucumba and Samama nature reserves (Los Ríos province), all at lower altitudes (400–800 m.a.s.l). Material was also collected in Cosanga and Yanayacu Field station in Napo province, and Otonga nature reserve in Cotopaxi province, located at high altitude (1900–2100 m.a.s.l). |
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Description des étapes de la méthode:
- DNA was extracted from specimens collected by hand which are part of longer series. An effort was made to include major morphological groups in the genus, with a deliberate bias towards species complexes in the atratus and cecropiavorus groups (Table 1). Partial sequences were amplified for the genes Cytochrome Oxidase I (COI, 690 bp), large subunit of ribosomal DNA (28S, 754 aligned bp) and Elongation Factor 1-α (EF-1α, 588 bp), using primers listed in Jordal et al. (Jordal et al. 2011). Separate Bayesian analyses of each gene, and combined data, were made in MrBayes 3.2.7 (Ronquist et al. 2012). Analyses were run for 10 million generations, with 5 million generations removed as burn in, after assessment of likelihood stationarity in Tracer (Rambaut et al. 2014). Data were also analysed by maximum likelihood (ML) in PAUP* (Swofford 2002). Evolutionary models selected were GTR+G+I for all three partitions, including 28S, COI first and second positions combined (due to limited variation in second position), and COI third position.
Métadonnées additionnelles
| Identifiants alternatifs | https://doi.org/10.11646/zootaxa.4813.1.1 |
|---|---|
| 85b25e06-1f6b-48ea-8597-136b0ca5f160 | |
| https://doi.org/10.5281/zenodo.3980828 | |
| https://ipt.gbif.no/resource?r=scolytodes-jordal-2020 |