NHMO DNA Bank Fish and Herptile collection

Latest version published by University of Oslo on Jul 19, 2021 University of Oslo

The NHMO DNA Bank Fish and Herptile collection at the Natural History Museum in Oslo (NHMO), Norway contains mainly fish scales collected in Norway from 1939 until present. It also contains other tissue and extracted DNA samples of fish and herptiles. Some of these have been taken from specimens in voucher collections either at NHMO or other museums, while others have been sampled from unvouchered specimens.

The collection is databased in Corema, a software that has been developed in close cooperation between the NHMO and the developer, Compositae AS (https://www.coremadb.com/). An accession generally refers to a given individual at a specific place and time; for each accession, one or more items may exist.

Data Records

The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 1,200 records. 6 extension data tables also exist. An extension record supplies extra information about a core record. The number of records in each extension data table is illustrated below.

  • Occurrence (core)
    1200
  • MaterialSample 
    1200
  • Preservation 
    1105
  • Preparation 
    491
  • ResourceRelationship 
    309
  • Permit 
    0
  • Multimedia 
    0

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Downloads

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 170,584 records in English (21 MB) - Update frequency: weekly
Metadata as an EML file download in English (9 KB)
Metadata as an RTF file download in English (7 KB)

Versions

The table below shows only published versions of the resource that are publicly accessible.

How to cite

Researchers should cite this work as follows:

Johannessen L E, Johnsen A (2021): NHMO DNA Bank Fish and Herptile collection. v1.80. University of Oslo. Dataset/Occurrence. https://ipt.gbif.no/resource?r=o_dna_fish_herptiles&v=1.80

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is University of Oslo. This work is licensed under a Creative Commons Attribution (CC-BY) 4.0 License.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: de2875e4-6f69-460a-b8c4-ead427afd53e.  University of Oslo publishes this resource, and is itself registered in GBIF as a data publisher endorsed by GBIF Norway.

Keywords

Occurrence; Specimen; Tissue sample; DNA extract; Fish scale; Occurrence

Contacts

Who created the resource:

Lars Erik Johannessen
Collection manager
Natural History Museum, University of Oslo Natural History Museum, P.O. Box 1172 Blindern NO-0318 Oslo NO
Arild Johnsen
Professor
Natural History Museum, University of Oslo Natural History Museum, P.O. Box 1172 Blindern NO-0318 Oslo NO

Who can answer questions about the resource:

Lars Erik Johannessen
Collection manager
Natural History Museum, University of Oslo Natural History Museum, P.O. Box 1172 Blindern NO-0318 Oslo NO
Arild Johnsen
Professor
Natural History Museum, University of Oslo Natural History Museum, P.O. Box 1172 Blindern NO-0318 Oslo NO

Who filled in the metadata:

Lars Erik Johannessen
Collection manager
Natural History Museum, University of Oslo Natural History Museum, P.O. Box 1172 Blindern NO-0318 Oslo NO

Who else was associated with the resource:

User
Rukaya Johaadien

Geographic Coverage

Global but with a main focus on Norway

Bounding Coordinates South West [-90, -180], North East [90, 180]

Taxonomic Coverage

Fish and herptiles

Class  Actinoperygii,  Amphibia,  Cephalaspidomorphi,  Holocephali,  Elasmobranchii,  Reptilia

Temporal Coverage

Formation Period 1876-current

Additional Metadata

Alternative Identifiers de2875e4-6f69-460a-b8c4-ead427afd53e
https://ipt.gbif.no/resource?r=o_dna_fish_herptiles